Utilization of some fruit rinds in small ruminant feeding: nutritional characteristics determination.

Every year, thousands of tons of fruit wastes are produced worldwide while most of them remain unused and are released into the environment. Incorporation of these wastes to feedstuffs reduces competition between food and feed, and reduces environmental risks or methane yield in ruminants. Nevertheless, no comprehensive research was available on the nutritional properties of rinds of different fruits in small ruminant feeding. Hence, this research investigates the nutritional potential of some fruit's rinds (Kiwi, Tangerine, Grapefruit, Sweet lemon, Sour lemon, Banana, Mango, Orange, Apple, Peach, and Persimmon) by in vitro ruminal-microbial and standard laboratory methods. Persimmon rind had the higher total phenolic contents (TPC, 22 mg gallic acid equivalents/g dry matter: DM) than the other treatments (P < 0.0001). The ether extract (EE), neutral detergent fiber (NDF), acid detergent fiber (ADF), and ash contents of banana rind were greater (P < 0.0001), however its DM, relative feed value (RFV), and non-fiber carbohydrates (NFC) were lower than the other treatments (P < 0.0001). A different range of minerals was observed among fruit rinds along with a higher content of potassium (42.5 g/kg DM) and manganese (49 mg/kg DM) in banana rind (P < 0.0001). Persimmon (45.7 ml/200 mg DM) and sweet lemon (75.7 ml/200 mg DM) rinds recorded the lowest and highest potential gas production, respectively (P < 0.0001). Persimmon exhibited a lower percentage of methane (11.5%) rather than other rinds (P < 0.0001). The total volatile fatty acids (TVFA) and metabolizable energy (ME) in sweet lemon, and dry matter digestibility (DMD) and organic matter digestibility (OMD) in tangerine were greater compared with other rinds. The rind of the banana exhibited the highest amounts of titratable acidity (283 mEq×10- 3), acid-buffering capacity (200 mEq×10- 3), and acid-base buffering capacity (260 mEq×10- 3) (P < 0.0001). In conclusion, the present rinds differed in chemical-nutritional characteristics. These rinds may feed as a substitute for conventional forages in the diets of small ruminants on a large scale throughout the year; however, these in vitro findings need to be scientifically validated under in vivo experiments.

Analysis of the Conformational Landscape of the N-Domains of the AAA ATPase p97: Disentangling the Continuous Conformational Variability in Partially Symmetrical Complexes.

Single-particle cryo-electron microscopy (cryo-EM) has been shown to be effective in defining the structure of macromolecules, including protein complexes. Complexes adopt different conformations and compositions to perform their biological functions. In cryo-EM, the protein complexes are observed in solution, enabling the recording of images of the protein in multiple conformations. Various methods exist for capturing the conformational variability through analysis of cryo-EM data. Here, we analyzed the conformational variability in the hexameric AAA + ATPase p97, a complex with a six-fold rotational symmetric core surrounded by six flexible N-domains. We compared the performance of discrete classification methods with our recently developed method, MDSPACE, which uses 3D-to-2D flexible fitting of an atomic structure to images based on molecular dynamics (MD) simulations. Our analysis detected a novel conformation adopted by approximately 2% of the particles in the dataset and determined that the N-domains of p97 sway by up to 60° around a central position. This study demonstrates the application of MDSPACE in analyzing the continuous conformational changes in partially symmetrical protein complexes, systems notoriously difficult to analyze due to the alignment errors caused by their partial symmetry.

In vitro ruminal-microbial fermentation pattern: nutritional insights about some agricultural crop mesocarps (peel) in ruminant nutrition.

Different agricultural crop wastes (ACW) such as mesocarps (peel) are annually produced after consuming their edible parts in the world without any scientific information about their nutritional potential. Therefore, a study was conducted to determine the ruminal-microbial fermentation pattern and nutritional potential of some crop mesocarps (peel) including different species of melons (Watermelon, Galia melon, Rockmelon, Til sabz, and Til atashi) as well as cucumber and eggplant using common and standard laboratory methods. The amount of crude protein (CP) varied from 7.19 to 19.1% of dry matter (DM) for Til sabz and cucumber mesocarps, respectively. The highest (34.1% of DM) and lowest (15.4%) content of neutral detergent fiber (NDF) were related to eggplant and Til sabz peels, respectively (p < 0.05). The content of non-fiber carbohydrates (NFC) varied from 38.7% for eggplant peel to 66.6% for Til sabz. All mesocarps had a low DM percentage (4.88% of DM for cucumber to 8.45 for eggplant). Rockmelon peel had the highest amount of calcium (5.25 g/kg DM) and magnesium (5.75 g/kg DM) compared with the other mesocarps (p < 0.05). The highest amounts of potassium (33.4 g/kg of DM), sodium (7.15 g/kg of DM), and zinc (21 mg/kg of DM) were observed in the peels of watermelon, Til atashi, and cucumber, respectively (p < 0.05). The potential of ruminal-microbial gas production also differed from 55.6 ml/200 mg of DM for eggplant to 63.1 ml for Til sabz peel. Except for cucumber (8.75 MJ/kg of DM) and eggplant (8.71 MJ), other mesocarps (different melon species) had almost similar metabolizable energy (ME, 9.06-9.50 MJ/kg of DM). Among the studied mesocarps, the lowest ruminal-microbial DM and organic matter (OM) digestibility was also observed in eggplant and cucumber (p < 0.05). Gallia melon had the highest acid-base buffering capacity (267 mEq×10- 3, p < 0.05). According to our findings, the mesocarps of melons showed a higher nutritional value than the cucumber and eggplant. In general, Til sabz exhibited a notable favorite and superior nutritional characteristic compared with the other mesocarps.

Molecular Mechanisms Driving and Regulating the AAA+ ATPase VCP/p97, an Important Therapeutic Target for Treating Cancer, Neurological and Infectious Diseases.

p97/VCP, a highly conserved type II ATPase associated with diverse cellular activities (AAA+ ATPase), is an important therapeutic target in the treatment of neurodegenerative diseases and cancer. p97 performs a variety of functions in the cell and facilitates virus replication. It is a mechanochemical enzyme that generates mechanical force from ATP-binding and hydrolysis to perform several functions, including unfolding of protein substrates. Several dozens of cofactors/adaptors interact with p97 and define the multifunctionality of p97. This review presents the current understanding of the molecular mechanism of p97 during the ATPase cycle and its regulation by cofactors and small-molecule inhibitors. We compare detailed structural information obtained in different nucleotide states in the presence and absence of substrates and inhibitors. We also review how pathogenic gain-of-function mutations modify the conformational changes of p97 during the ATPase cycle. Overall, the review highlights how the mechanistic knowledge of p97 helps in designing pathway-specific modulators and inhibitors.

Eubiotic Effect of a Dietary Bio-Aqua® and Sodium Diformate (NaDF) on Salmo trutta caspius: Innate Immune System, Biochemical Indices, Antioxidant Defense, and Expression of Immunological and Growth-Related Genes.

The present study investigated the effects of combined and singular oral administration of Bio-Aqua® with different dosages of sodium diformate (NaDF) on biochemical indices, innate immune responses, antioxidant effects, and expressions of immunological related genes of Caspian brown trout (Salmo trutta caspius). Fingerlings Salmo trutta caspius (n = 1800; initial weight 15 ± 3 g) were randomly allocated into five groups (120 fish group-1 in triplicates). Control diet: without any addition, G1, G2, G3, and G4 received diets containing 0.2 g kg-1 commercial probiotic Bio-Aqua® combined with 0, 0.5, 1.0, and 1.5% NaDF to the basal diet for 60 days according to recommended dosages reported in previous studies. Results indicated that serum bactericidal activity (G3 on day 60 and G1 on day 30) and classic complement in all groups (on day 60) (G1 and G2 on day 30) were significantly elevated (P < 0.05). The serum lysozyme, glucose, globulin, and albumin levels showed no significant differences between all groups compared to the control group (P > 0.05). On days 30 and 60 of the sampling, no significant difference was observed in the amount of superoxide disotase (SOD) and catalase (CAT) between the treatments (P > 0.05) but activity of malondialdehyde (MDA) was lower in G1 than the control (P < 0.05). The expression of the immune-regulating genes IL-10, IL-1ß, GTP, FATP, and IGF was significantly improved in all probiotic + acidifier-treated groups (P < 0.05). The current findings showed that mixture of Bio-Aqua® and NaDF (1.5% + pro) is beneficial, as it effectively improves some immune parameters and expression of immunological and growth-related genes in Caspian brown trout.

An investigation on chemical/mineral compositions, ruminal microbial fermentation, and feeding value of some leaves as alternative forages for finishing goats during the dry season.

Finding new fodder resources with moderate to high nutritional value that are cheaper and available is one of the most challenges in livestock industries. Hence, the nutritive value of some tree leaves (quince, pear, olive, mirabelle plum, greengage, sour cherry, and persimmon) was investigated by different laboratories and in vitro methods. Also, partial substitution of alfalfa and corn silage (50%) with these leaves was investigated using forty-eight goats in a randomized complete block design in vivo. Highest total phenol and tannin contents were obtained in quince (p < 0.001). Greengage (146.37 g/kg DM) and persimmon (136.96 g/kg DM) exhibited the highest crude protein, respectively (p < 0.001). Calcium content (19.82 g/kg DM) was highest in persimmon leaves (p < 0.001). Greengage (66.07 mmol/L) and mirabelle plum (65.58 mmol/L) produced more total volatile fatty acids in the culture medium, respectively (p < 0.001). Potential gas production ranged from 39.65 mL for pear to 55.32 mL mirabelle plum. Sour cherry had the highest acid-base buffering capacity (183.73 mEq × 10-3, p < 0.001). Highest dry matter intake (1087 g/day) and crude protein digestibility (70.80 %) were observed in diets containing greengage (p < 0.001). Total antioxidant capacity of serum increased when olive, quince, and persimmon were considered in goats feeding (p < 0.001). Although all studied leaves can be fed in diets of goats without deleterious effects on performance, serum, and hematology parameters, in vivo and in vitro results indicated that greengage in terms of nutritive value was superior to other studied leaves.

Chemical composition, antimicrobial and antioxidant activities of the essential oil of Psammogeton canescens.

This study reports the chemical composition, antimicrobial activity and antioxidant properties of Psammogeton canescens essential oil (EO) and its main compounds. The EO was obtained from the aerial parts of P. canescens by hydrodistillation and analysed by using GC/MS. The main constituent was ß-bisabolene (25%), followed by α-pinene (20%), apiole (15.34%), γ-terpinene (7.34%), p-cymene (5.35%), ß-pinene (5.41%), camphene (5.12%), dill apiole (5%), myrcene (4.54%), colchicine (0.56), sylvestrene (0.56%), ß-caryophyllene (0.45%), caryophyllene oxide (0.43%), (Z)-ß-farnesene (0.32%), cembrene (0.21%), folic acid (0.21%), germacrene D (0.14) and ß-sesquiphellandrene (0.13). ß-Bisabolene exhibited strong antioxidant activity (14 ± 0.8 µg/mL). The EO of P. canescens was particularly active against Candida albicans and Escherichia coli, with the lowest minimum inhibitory concentration and minimum bactericidal/fungicidal concentration values. In conclusion, these results support the use of the EO and its main compounds for their antioxidant properties and antimicrobial activity.

Chemical composition and biological activities of Iranian Achillea wilhelmsii L. essential oil: a high effectiveness against Candida spp. and Escherichia strains.

In the case of Achillea wilhelmsii, 30 compounds were identified representing 94.48% of the total oil with a yield of 0.82% w/w. The major constituents of the oil were described as α-thujene (6.11%), α-pinene (5.11%), sabinene (5.23%), p-cymene (7%), 1,8-cineole (6%), linalool (10%), camphor (8.43%), thymol (18.98%) and carvacrol (20.13%). A. wilhelmsii oil exhibited higher antibacterial and antifungal activities with a high effectiveness against Escherichia coli and Candida albicans with the lowest minimum inhibitory concentration and minimum bactericidal concentration/minimum fungicidal concentration value (2 ± 0.0-2 ± 0.0 g/mL, 1 ± 0.5-1 ± 0.5 g/mL), respectively. Results showed that A. wilhelmsii oil exhibits a higher activity in each antioxidant system with a special attention for ß-carotene bleaching test (IC50: 19 µg/mL) and reducing power (EC50: 10 µg/mL). Antioxidant activity-guided fractionation of the oil was carried out by TLC-bioautography screening and fractionation resulted in the separation of main antioxidant compounds which were identified as thymol (65%) and carvacrol (19%). In conclusion, these results support the use of the essential oil and its main compounds for their antioxidant properties and antimicrobial activity.